STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_24365Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family. (466 aa)    
Predicted Functional Partners:
BAMA_00650
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
BAMA_24360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
BAMA_00645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.843
BAMA_00560
Acyl-carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
BAMA_04550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
BAMA_04575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.652
BAMA_19490
Acyl carrier protein; Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
BAMA_19495
Petrobactin biosynthesis protein AsbE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
BAMA_24370
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.536
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.