STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACIS_00526Putative plasmid conjugal transfer protein. (1386 aa)    
Predicted Functional Partners:
virB3
Type IV secretion system protein VirB3.
 
  
 0.969
virB8
Type IV secretion system protein VirB8.
 
  
 0.934
virB4
Type IV secretion system protein VirB4.
 
  
 0.923
virB9
Type IV secretion system protein VirB9.
 
 
 0.918
ACIS_00304
Type IV secretion system protein VirB4.
 
  
 0.899
virB10
Type IV secretion system protein VirB10.
 
  
 0.897
ACIS_00524
Putative type IV secretion system protein; Contains conserved domain pfam04610: TrbL/VirB6 plasmid conjugal transfer protein.
 
   
0.866
ACIS_00856
Hypothetical protein.
  
   
 0.857
trbG
Putative conjugal transfer protein TrbG.
 
 
 0.852
ACIS_00530
Putative conjugal transfer protein.
 
    
0.829
Your Current Organism:
Anaplasma centrale
NCBI taxonomy Id: 574556
Other names: A. centrale str. Israel, Anaplasma centrale str. Israel, Anaplasma centrale strain Israel, Anaplasma marginale subsp. centrale str. Israel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.