Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACIS_01083 | ACIS_01084 | ACIS_01083 | ACIS_01084 | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | Hypothetical protein. | 0.817 |
ACIS_01083 | aspS | ACIS_01083 | ACIS_01082 | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.599 |
ACIS_01083 | maeB | ACIS_01083 | ACIS_00022 | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | Malic enzyme. | 0.608 |
ACIS_01083 | ppdK | ACIS_01083 | ACIS_01086 | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.419 |
ACIS_01083 | putA | ACIS_01083 | ACIS_00730 | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.453 |
ACIS_01083 | rpe | ACIS_01083 | ACIS_00187 | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.523 |
ACIS_01084 | ACIS_01083 | ACIS_01084 | ACIS_01083 | Hypothetical protein. | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | 0.817 |
ACIS_01084 | aspS | ACIS_01084 | ACIS_01082 | Hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.463 |
ACIS_01084 | ppdK | ACIS_01084 | ACIS_01086 | Hypothetical protein. | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.432 |
aspS | ACIS_01083 | ACIS_01082 | ACIS_01083 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | 0.599 |
aspS | ACIS_01084 | ACIS_01082 | ACIS_01084 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Hypothetical protein. | 0.463 |
maeB | ACIS_01083 | ACIS_00022 | ACIS_01083 | Malic enzyme. | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | 0.608 |
maeB | ppdK | ACIS_00022 | ACIS_01086 | Malic enzyme. | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.956 |
maeB | putA | ACIS_00022 | ACIS_00730 | Malic enzyme. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.566 |
maeB | rpe | ACIS_00022 | ACIS_00187 | Malic enzyme. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.468 |
ppdK | ACIS_01083 | ACIS_01086 | ACIS_01083 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | 0.419 |
ppdK | ACIS_01084 | ACIS_01086 | ACIS_01084 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Hypothetical protein. | 0.432 |
ppdK | maeB | ACIS_01086 | ACIS_00022 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Malic enzyme. | 0.956 |
putA | ACIS_01083 | ACIS_00730 | ACIS_01083 | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Putative phosphatase; Contains conserved domain COG0546: predicted phosphatases. | 0.453 |
putA | maeB | ACIS_00730 | ACIS_00022 | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Malic enzyme. | 0.566 |
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