STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YJT8_COCSCCSD_1 domain-containing protein. (949 aa)    
Predicted Functional Partners:
I0YL80_COCSC
Uncharacterized protein.
   
 0.996
I0YJA5_COCSC
Kinase-like protein.
    
 0.928
I0YXS6_COCSC
ARM repeat-containing protein.
    
 0.920
I0Z4Y4_COCSC
TOR kinase binding protein.
    
 0.869
I0Z968_COCSC
DEP domain-containing protein.
    
 0.863
I0YRY7_COCSC
14-3-3 protein; Belongs to the 14-3-3 family.
   
 0.855
I0YPK0_COCSC
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.851
I0YSP1_COCSC
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.848
I0YMP4_COCSC
Uncharacterized protein.
   
 0.822
I0YNX7_COCSC
Uncharacterized protein.
   
 0.822
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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