STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YK20_COCSCMethionine adenosyltransferase regulatory beta subunit-related. (317 aa)    
Predicted Functional Partners:
I0Z297_COCSC
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.780
I0YR81_COCSC
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.771
I0Z093_COCSC
Uncharacterized protein.
   
 
 0.743
I0YUD2_COCSC
SE-domain-containing protein.
   
 
 0.682
I0Z1Q6_COCSC
FAD/NAD(P)-binding domain-containing protein.
   
 
 0.682
I0ZAF0_COCSC
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
   
 0.670
I0Z8D1_COCSC
Farnesyl-diphosphate farnesyltransferase.
  
 
 0.666
I0Z920_COCSC
Chloroplast phytoene synthase.
  
 
 0.666
I0Z605_COCSC
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.654
I0YM48_COCSC
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
  0.643
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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