STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YK98_COCSCIsy1-like splicing factor. (271 aa)    
Predicted Functional Partners:
I0YVM8_COCSC
TPR-like protein.
   
 0.997
I0YX29_COCSC
Protein prenylyltransferase.
    
 0.997
I0Z8B0_COCSC
G10 protein.
   
 0.997
I0YRP9_COCSC
Cyclic nucleotide-binding domain-containing protein.
    
 0.996
I0YL39_COCSC
Spliceosome component, nuclear pre-mRNA splicing factor.
    
 0.995
I0YXS4_COCSC
Uncharacterized protein.
   
 0.993
I0YTQ2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
 
  
 0.990
I0YM58_COCSC
RRM domain-containing protein.
   
  0.980
I0YPR9_COCSC
Gcip-interacting family protein-like protein.
   
 
 0.976
I0Z4G5_COCSC
Splicing factor, component of the U5 snRNP and of the spliceosome.
    
 
 0.968
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.