STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YKH7_COCSCRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1045 aa)    
Predicted Functional Partners:
I0YPT0_COCSC
DUF663-domain-containing protein.
  
 
 0.975
I0YZQ7_COCSC
ARM repeat-containing protein.
   
 
 0.960
I0Z784_COCSC
BP28CT domain-containing protein.
   
 
 0.959
I0YM64_COCSC
WD40 repeat-like protein.
   
 
 0.958
I0YU81_COCSC
WD40 repeat-like protein.
   
 
 0.956
I0YYB1_COCSC
Uncharacterized protein.
   
 
 0.956
I0ZA68_COCSC
Nop14-like protein.
   
 
 0.956
I0YRS0_COCSC
Nop-domain-containing protein.
   
 
 0.955
I0Z442_COCSC
WD40 repeat-like protein.
   
 
 0.955
I0Z496_COCSC
Nop-domain-containing protein.
   
 
 0.952
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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