STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YLY6_COCSCDUF393-domain-containing protein. (189 aa)    
Predicted Functional Partners:
I0YKC8_COCSC
Acyl-CoA N-acyltransferase.
   
 0.853
I0YKQ6_COCSC
Putative acyltransfersase.
   
 0.853
I0YSC7_COCSC
Small nuclear ribonucleoprotein-associated protein.
    
 0.842
I0Z5J6_COCSC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.736
I0YSB4_COCSC
TPR_REGION domain-containing protein.
   
  
 0.475
I0Z9E6_COCSC
Acyl-CoA N-acyltransferase.
    
 
 0.436
I0ZAM5_COCSC
N-terminal acetyltransferase A, auxiliary subunit.
   
  
 0.412
I0YML5_COCSC
Catalytic subunit of N-acetyltransferase.
      
 0.404
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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