STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YNK9_COCSCThiamine pyrophosphate protein domain protein TPP-binding protein; Belongs to the TPP enzyme family. (603 aa)    
Predicted Functional Partners:
I0Z0T7_COCSC
Acetolactate synthase.
  
 
 0.968
I0Z6M5_COCSC
Dihydroxy-acid dehydratase.
 
  
 0.750
I0YS96_COCSC
Isocitrate lyase.
  
  
 0.700
I0YW85_COCSC
IGPS domain-containing protein.
  
  
 0.699
I0Z4I3_COCSC
RING-type domain-containing protein.
   
 
  0.610
I0YPZ9_COCSC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
  
 0.585
I0YPK3_COCSC
D-aminoacid aminotransferase-like PLP-dependent enzyme.
  
 
 0.535
I0YYU4_COCSC
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.535
I0Z930_COCSC
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.535
I0Z626_COCSC
Aspartokinase; Belongs to the aspartokinase family.
  
  
 0.528
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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