STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YP49_COCSCUncharacterized protein. (1063 aa)    
Predicted Functional Partners:
I0YR94_COCSC
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.778
I0YJZ4_COCSC
Transketolase 7.
   
  
 0.708
I0YR21_COCSC
Ribosomal protein L23a component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL23 family.
   
    0.692
I0YY76_COCSC
Asparaginyl-tRNA synthetase.
  
  
 0.688
I0YU98_COCSC
Metallo-hydrolase/oxidoreductase.
   
  
 0.661
I0YR68_COCSC
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
     
 0.651
I0Z6B4_COCSC
Enolase.
   
 
 0.640
I0YR07_COCSC
Trigger factor.
  
  
 0.625
I0YJE2_COCSC
DNA-directed RNA polymerase II, 36 kDa polypeptide.
   
  
 0.624
I0YTG9_COCSC
Insert subdomain of RNA polymerase alpha subunit.
   
  
 0.624
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.