STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YPF9_COCSCEukaryotic initiation factor 4A-11; Belongs to the DEAD box helicase family. (387 aa)    
Predicted Functional Partners:
I0YK73_COCSC
ARM repeat-containing protein.
   
 0.966
I0Z410_COCSC
MI domain-containing protein.
   
 0.957
I0YVL4_COCSC
RRM domain-containing protein.
    
 0.920
I0YPF7_COCSC
Eukaryotic initiation factor 4A-like protein; Belongs to the DEAD box helicase family.
  
  
 
0.901
I0YVR0_COCSC
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.800
I0Z091_COCSC
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.800
I0YYJ3_COCSC
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.739
I0YX21_COCSC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.728
I0ZAL7_COCSC
W2 domain-containing protein.
   
 0.718
I0YUW3_COCSC
Elongation factor 2.
   
 0.717
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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