Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I0YIE7_COCSC | I0YPV2_COCSC | I0YIE7 | I0YPV2 | BAH-domain-containing protein. | Uncharacterized protein. | 0.401 |
I0YJB6_COCSC | I0YPV2_COCSC | I0YJB6 | I0YPV2 | DHS-like NAD/FAD-binding domain-containing protein. | Uncharacterized protein. | 0.476 |
I0YJB6_COCSC | I0Z3K2_COCSC | I0YJB6 | I0Z3K2 | DHS-like NAD/FAD-binding domain-containing protein. | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | 0.803 |
I0YPV2_COCSC | I0YIE7_COCSC | I0YPV2 | I0YIE7 | Uncharacterized protein. | BAH-domain-containing protein. | 0.401 |
I0YPV2_COCSC | I0YJB6_COCSC | I0YPV2 | I0YJB6 | Uncharacterized protein. | DHS-like NAD/FAD-binding domain-containing protein. | 0.476 |
I0YPV2_COCSC | I0Z3K2_COCSC | I0YPV2 | I0Z3K2 | Uncharacterized protein. | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | 0.404 |
I0YPV2_COCSC | I0Z9F0_COCSC | I0YPV2 | I0Z9F0 | Uncharacterized protein. | Fertilization-independent endosperm protein 2. | 0.463 |
I0Z3K2_COCSC | I0YJB6_COCSC | I0Z3K2 | I0YJB6 | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | DHS-like NAD/FAD-binding domain-containing protein. | 0.803 |
I0Z3K2_COCSC | I0YPV2_COCSC | I0Z3K2 | I0YPV2 | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | Uncharacterized protein. | 0.404 |
I0Z9F0_COCSC | I0YPV2_COCSC | I0Z9F0 | I0YPV2 | Fertilization-independent endosperm protein 2. | Uncharacterized protein. | 0.463 |