STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YQZ0_COCSCUbiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (380 aa)    
Predicted Functional Partners:
I0YM71_COCSC
Uncharacterized protein.
   
 0.981
I0YPV4_COCSC
Uncharacterized protein; Belongs to the peptidase M16 family.
 
 
    0.873
I0Z5I7_COCSC
Uncharacterized protein; Belongs to the peptidase M16 family.
 
 
    0.833
rps14
Ribosomal protein S14.
    
 
 0.598
I0YZL0_COCSC
Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.564
I0YV96_COCSC
DNA replication factor C complex subunit 5.
    
 0.553
I0YUV4_COCSC
DNA replication factor C complex subunit 2.
    
  0.551
I0Z569_COCSC
Putative replication factor C 37 kDa subunit.
    
  0.551
I0Z9A3_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.551
rpl16
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.549
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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