STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YR67_COCSCClass II aaRS and biotin synthetase. (322 aa)    
Predicted Functional Partners:
I0ZAB6_COCSC
Biotin synthase.
  
 
 0.926
I0Z8S4_COCSC
BPL_N domain-containing protein.
 
      0.900
I0YI54_COCSC
Uncharacterized protein.
  
 0.778
I0YIE3_COCSC
Pyruvate carboxylase.
  
 
 0.761
I0YVC8_COCSC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.705
I0YW85_COCSC
IGPS domain-containing protein.
  
  
 0.694
I0YJE2_COCSC
DNA-directed RNA polymerase II, 36 kDa polypeptide.
    
 0.648
I0YL58_COCSC
Urea carboxylase.
  
 
 0.577
I0YQ77_COCSC
Allophanate hydrolase.
  
 
 0.577
I0Z4I8_COCSC
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
      0.536
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.