STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YSH4_COCSCTerpenoid synthase. (289 aa)    
Predicted Functional Partners:
I0YQB5_COCSC
Uncharacterized protein.
   
 0.896
nad1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.
   
 
 0.814
I0YJQ5_COCSC
DUF185-domain-containing protein.
     
 0.788
I0YXA8_COCSC
VDE-domain-containing protein.
   
  
 0.776
I0Z093_COCSC
Uncharacterized protein.
   
 
 0.748
I0Z142_COCSC
Uncharacterized protein.
     
 0.743
nad7
NADH dehydrogenase subunit 7; Belongs to the complex I 49 kDa subunit family.
   
 
 0.742
I0YTH3_COCSC
DUF498-domain-containing protein.
     
 0.739
I0YUI4_COCSC
NADH-quinone oxidoreductase.
   
 
 0.703
nad9
NADH dehydrogenase subunit 9; Belongs to the complex I 30 kDa subunit family.
   
 0.694
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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