STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YTY4_COCSCNAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (456 aa)    
Predicted Functional Partners:
I0YS34_COCSC
Dehydrogenase.
  
 
 0.575
I0YKF0_COCSC
Short-chain dehydrogenase/reductase SDR.
  
     0.530
I0YQG6_COCSC
Short-chain dehydrogenase/reductase SDR.
  
     0.530
I0YUL3_COCSC
NAD(P)-binding protein.
  
     0.527
I0YY57_COCSC
NAD(P)-binding protein.
  
     0.527
I0YYT3_COCSC
NAD(P)-binding protein.
  
     0.527
I0YUL2_COCSC
Short-chain dehydrogenase-like protein.
  
     0.526
I0YY70_COCSC
NAD(P)-binding protein.
  
     0.526
I0YY69_COCSC
Putative short-chain dehydrogenase/reductase Mc1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.524
I0YY74_COCSC
Uncharacterized protein.
  
     0.524
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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