STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YU24_COCSCPIN domain-like protein. (347 aa)    
Predicted Functional Partners:
I0YLE8_COCSC
DNA mismatch repair protein MutL.
   
 0.987
I0Z2B1_COCSC
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.976
I0YMF5_COCSC
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 0.947
I0YSX7_COCSC
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.947
I0Z0B8_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.944
I0YWK3_COCSC
DNA ligase.
  
 0.938
I0Z527_COCSC
CDC45-like protein.
   
  
 0.899
I0YP57_COCSC
Uncharacterized protein.
   
 0.898
I0YJN0_COCSC
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
  
 0.897
I0Z9A3_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.887
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.