STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YU78_COCSCSecY protein; Belongs to the SecY/SEC61-alpha family. (472 aa)    
Predicted Functional Partners:
I0YL40_COCSC
60S ribosomal protein L7.
  
 
 0.999
I0YLE0_COCSC
60S ribosomal protein L5.
  
 
 0.999
I0YM48_COCSC
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
I0YR21_COCSC
Ribosomal protein L23a component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
I0YR45_COCSC
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
I0YS97_COCSC
Mitochondrial ribosomal protein S6.
   
 
 0.999
I0YYD3_COCSC
Uncharacterized protein.
   
 0.997
I0Z4K1_COCSC
SecE/sec61-gamma protein.
   
 0.997
I0YSN7_COCSC
Ribosomal protein L24.
  
 
 0.991
I0Z5G8_COCSC
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.989
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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