STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YUD2_COCSCSE-domain-containing protein. (508 aa)    
Predicted Functional Partners:
I0YR81_COCSC
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
 
 
 0.986
I0Z8D1_COCSC
Farnesyl-diphosphate farnesyltransferase.
  
 
 0.973
I0Z297_COCSC
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.963
I0Z4X8_COCSC
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.857
I0YNS0_COCSC
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 0.838
I0YT23_COCSC
Sterol 14 desaturase; Belongs to the cytochrome P450 family.
  
 
 0.829
I0YWL8_COCSC
Isopentenyldiphosphate isomerase.
   
  
 0.770
I0YJZ2_COCSC
Sterol reductase.
  
 
 0.764
I0YLS6_COCSC
NAD(P) dependent steroid dehydrogenase-like protein; Belongs to the 3-beta-HSD family.
  
 
 0.743
I0Z580_COCSC
Sterol delta-7 reductase DWF5.
   
 
 0.690
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.