STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YVF0_COCSC1-deoxy-D-xylulose 5-phosphate synthase. (732 aa)    
Predicted Functional Partners:
I0YZA9_COCSC
1-deoxy-D-xylulose 5-phosphate reductoisomerase.
  
 
 0.971
I0Z8C7_COCSC
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
  
 
 0.888
I0Z920_COCSC
Chloroplast phytoene synthase.
   
  
 0.838
I0Z6E1_COCSC
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.831
I0YRD4_COCSC
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
 
   
 0.798
I0Z5K3_COCSC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.784
I0Z417_COCSC
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.725
I0Z7H5_COCSC
Aldolase.
  
 
 0.725
I0Z9L5_COCSC
Putative transaldolase.
  
 
 0.725
I0YWB9_COCSC
Phytoene desaturase.
   
  
 0.719
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.