STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YWB9_COCSCPhytoene desaturase. (1193 aa)    
Predicted Functional Partners:
I0YJ45_COCSC
ARID-like protein.
    
  0.979
I0Z9L7_COCSC
ARID domain-containing protein.
    
  0.979
I0Z920_COCSC
Chloroplast phytoene synthase.
   
  
 0.929
I0YVF0_COCSC
1-deoxy-D-xylulose 5-phosphate synthase.
   
  
 0.719
I0YXM5_COCSC
NnrU domain-containing protein.
  
   
 0.687
I0YPK9_COCSC
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
      
 0.661
I0YZC4_COCSC
Lycopene cyclase family.
      
 0.660
I0YZT6_COCSC
Beta cyclase.
      
 0.660
I0Z6E1_COCSC
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
      
 0.651
I0YY37_COCSC
Homogentisate solanesyltransferase.
   
  
 0.639
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.