STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YXM5_COCSCNnrU domain-containing protein. (367 aa)    
Predicted Functional Partners:
I0Z5M9_COCSC
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.990
I0YZC4_COCSC
Lycopene cyclase family.
      
 0.797
I0ZAZ1_COCSC
Cytochrome P450; Belongs to the cytochrome P450 family.
      
 0.699
I0YWB9_COCSC
Phytoene desaturase.
  
   
 0.687
I0Z8T0_COCSC
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
      
 0.629
I0Z5C5_COCSC
Carotenoid isomerase.
   
  
 0.608
I0YZT6_COCSC
Beta cyclase.
      
 0.600
I0YTN7_COCSC
FAD/NAD(P)-binding domain-containing protein.
      
 0.550
I0Z920_COCSC
Chloroplast phytoene synthase.
      
 0.550
I0YXA8_COCSC
VDE-domain-containing protein.
      
 0.487
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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