STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0YZ15_COCSCHistone H3; Belongs to the histone H3 family. (136 aa)    
Predicted Functional Partners:
I0YU00_COCSC
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.987
I0Z402_COCSC
Uncharacterized protein.
   
 0.970
I0YIE7_COCSC
BAH-domain-containing protein.
    
 0.945
I0YMJ4_COCSC
JmjC domain-containing protein.
    
 0.834
I0YNR0_COCSC
Histone H2A; Belongs to the histone H2A family.
 
 
 0.811
I0YL44_COCSC
Histone H2B; Belongs to the histone H2B family.
 
 
 0.783
I0YL88_COCSC
Histone H2B; Belongs to the histone H2B family.
 
 
 0.774
I0YTA3_COCSC
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.768
I0Z5A4_COCSC
Uncharacterized protein.
    
 0.754
I0YJ45_COCSC
ARID-like protein.
   
 0.748
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.