STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z036_COCSCMalate dehydrogenase. (329 aa)    
Predicted Functional Partners:
I0Z4V7_COCSC
Citrate synthase; Belongs to the citrate synthase family.
  
 0.971
I0YWX6_COCSC
Citrate synthase.
  
 0.964
I0YQQ2_COCSC
Aminotran_1_2 domain-containing protein.
   
 0.952
I0YPA4_COCSC
Malic-domain-containing protein.
  
 0.951
I0YLU9_COCSC
Aspartate aminotransferase.
   
 0.950
I0YIW6_COCSC
Aspartate aminotransferase.
   
 0.949
I0YS95_COCSC
Malate synthase; Belongs to the malate synthase family.
   
 0.949
I0Z6W7_COCSC
Fumarate hydratase.
  
 0.949
I0YXK3_COCSC
Citrate synthase.
  
 0.944
I0Z1U0_COCSC
ATP-citrate lyase subunit A.
  
 0.944
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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