STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z189_COCSCPseudouridine synthase. (352 aa)    
Predicted Functional Partners:
I0ZB13_COCSC
Uncharacterized protein.
  
 
 0.606
I0Z2X1_COCSC
tRNA pseudouridine synthase D.
    
 
 0.598
I0YJQ2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.554
I0Z7L1_COCSC
Uncharacterized protein.
  
 
 0.550
I0YZL0_COCSC
Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
   0.514
I0YZ73_COCSC
MRP-L47-domain-containing protein.
    
 
 0.508
I0YX17_COCSC
L51_S25_CI-B8 domain-containing protein.
   
   0.503
I0YM20_COCSC
Ribosomal protein L21.
   
   0.485
I0YMV1_COCSC
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.485
I0YR80_COCSC
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.485
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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