STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z1L1_COCSCUncharacterized protein. (964 aa)    
Predicted Functional Partners:
I0Z3X0_COCSC
Uncharacterized protein.
   
 0.794
I0YVD9_COCSC
SWIB domain-containing protein.
   
 0.791
I0Z9X2_COCSC
Putative Acttin-related protein 4; Belongs to the actin family.
    
 0.788
I0Z6K0_COCSC
Bromo domain-containing protein.
    
 0.780
I0YIK5_COCSC
ARID domain-containing protein.
    
 0.744
I0YRE0_COCSC
MPN domain-containing protein.
    
 0.718
I0YIM9_COCSC
SWIRM domain-containing protein.
    
 0.690
I0Z0S9_COCSC
SWIB-domain-containing protein.
    
 0.678
I0YJ45_COCSC
ARID-like protein.
   
 
 0.664
I0Z9L7_COCSC
ARID domain-containing protein.
   
 
 0.664
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.