STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z2Z3_COCSCProtein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (526 aa)    
Predicted Functional Partners:
I0YL46_COCSC
Peptide methionine sulfoxide reductase.
     
 0.585
I0YRD4_COCSC
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
     
 0.567
I0YM73_COCSC
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
   
  
 0.563
I0YTV7_COCSC
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
   
  
 0.563
I0YPP8_COCSC
Uncharacterized protein.
     
 0.559
I0YPT1_COCSC
SKI-domain-containing protein.
  
  
 0.557
I0YRN6_COCSC
Shikimate kinase.
  
  
 0.557
I0YI05_COCSC
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
   
  
 0.554
I0YJG8_COCSC
Uncharacterized protein.
      
 0.554
I0YR92_COCSC
Ribokinase-like protein.
      
 0.554
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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