STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z4E6_COCSCMetallo-hydrolase/oxidoreductase. (696 aa)    
Predicted Functional Partners:
I0Z2U9_COCSC
Cleavage and polyadenylation specificity factor subunit 2.
   
0.997
I0YR31_COCSC
Uncharacterized protein.
   
 0.992
I0Z9W0_COCSC
CPSF_A domain-containing protein.
   
 0.991
I0Z004_COCSC
Ssu72-like protein.
   
 0.990
I0YM88_COCSC
WD40 repeat-like protein.
   
 0.986
I0Z6B2_COCSC
WD40 repeat-like protein.
   
 0.986
I0Z571_COCSC
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2.
   
 0.984
I0YNT3_COCSC
Uncharacterized protein.
   
 0.951
I0ZAR8_COCSC
CID domain-containing protein.
    
 0.945
I0YNP8_COCSC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.944
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.