STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z4K3_COCSCHECT-domain-containing protein. (351 aa)    
Predicted Functional Partners:
I0YXW7_COCSC
UVB-resistance 8.
 
  
  0.914
I0YLY5_COCSC
RCC1/BLIP-II.
 
  
  0.913
I0YLY4_COCSC
HECT-domain-containing protein.
  
  
 
0.903
I0YS05_COCSC
RCC1/BLIP-II.
 
      0.899
I0Z4K2_COCSC
RCC1/BLIP-II.
 
  
  0.774
I0YQL8_COCSC
HECT domain-containing protein.
   
 
0.691
I0YT91_COCSC
RCC1/BLIP-II.
 
  
  0.577
I0YPN0_COCSC
Uncharacterized protein.
 
   
  0.531
I0YZH0_COCSC
tRNA-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
  
   0.496
I0YW08_COCSC
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.482
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.