STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z5E4_COCSCUncharacterized protein. (685 aa)    
Predicted Functional Partners:
I0Z5S9_COCSC
Uncharacterized protein.
  
  
 
0.908
I0Z0B8_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.885
I0Z7C9_COCSC
ARM repeat-containing protein.
 
  
   0.871
I0Z0D2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.838
I0Z402_COCSC
Uncharacterized protein.
  
0.752
I0YVU0_COCSC
Uncharacterized protein.
   
 0.720
I0Z1J8_COCSC
Uncharacterized protein.
   
 
 0.694
I0YU24_COCSC
PIN domain-like protein.
   
 0.693
I0YWK3_COCSC
DNA ligase.
   
 0.660
I0YJ45_COCSC
ARID-like protein.
   
 0.601
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.