STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z5H6_COCSCUncharacterized protein. (253 aa)    
Predicted Functional Partners:
I0Z5S8_COCSC
Uncharacterized protein.
   
   0.648
I0ZA93_COCSC
Uncharacterized protein.
   
 
 0.623
I0YX16_COCSC
MRP-S28 domain-containing protein.
   
   0.613
I0Z8C5_COCSC
Uncharacterized protein.
   
 
 0.609
I0YP22_COCSC
Translation protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.608
I0Z400_COCSC
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.608
rpl16
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
   0.606
I0Z4A5_COCSC
Uncharacterized protein.
   
 
 0.588
I0YZ73_COCSC
MRP-L47-domain-containing protein.
   
 
 0.585
I0YQ55_COCSC
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.584
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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