STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z6L4_COCSCHypersensitive-induced response protein. (292 aa)    
Predicted Functional Partners:
I0YLA9_COCSC
Prohibitin.
   
 
 0.575
I0Z4M1_COCSC
Rhomboid-domain-containing protein.
   
 0.551
I0Z3U2_COCSC
Cyclic nucleotide dependent protein kinase.
    
 
 0.535
I0YWZ1_COCSC
ATP-dependent metallopeptidase Hfl; Belongs to the AAA ATPase family.
   
 0.493
I0Z3H7_COCSC
ATP-dependent metallopeptidase Hfl; Belongs to the AAA ATPase family.
   
 0.493
I0YM40_COCSC
Prohibitin.
   
 
 0.456
I0YRY7_COCSC
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.456
I0YLY3_COCSC
PHB domain-containing protein.
   
 
 0.435
ftsH
Cell division protein.
   
 0.429
I0YM60_COCSC
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
   
 0.429
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.