STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z6L8_COCSCSECA_MOTOR_DEAD domain-containing protein. (644 aa)    
Predicted Functional Partners:
I0Z764_COCSC
Protein translocase subunit SecA; Belongs to the SecA family.
  
  
 
0.904
I0Z7C7_COCSC
TPR-like protein.
    
 0.740
I0Z8N9_COCSC
CDC73-domain-containing protein.
    
 0.734
I0Z5N7_COCSC
Uncharacterized protein.
    
  0.681
I0YLH9_COCSC
UBC-like protein.
    
 0.607
I0Z062_COCSC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.607
I0Z067_COCSC
FAS1 domain-containing protein.
   
 0.538
I0Z9Y1_COCSC
SecY protein; Belongs to the SecY/SEC61-alpha family.
      
 0.515
I0Z5G5_COCSC
Plus3 domain-containing protein.
    
 0.484
I0YYD4_COCSC
Cell division protein FtsZ.
 
  
   0.465
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.