STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z6M5_COCSCDihydroxy-acid dehydratase. (582 aa)    
Predicted Functional Partners:
I0Z115_COCSC
2-isopropylmalate synthase.
 
 
 0.989
I0YYU4_COCSC
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.980
I0Z930_COCSC
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.980
I0YXF1_COCSC
Acetohydroxy acid isomeroreductase; Belongs to the ketol-acid reductoisomerase family.
  
 0.976
I0YV34_COCSC
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
     
 0.960
I0YS85_COCSC
Acetolactate synthase.
  
 0.949
I0Z0T7_COCSC
Acetolactate synthase.
 
 
 0.911
I0Z4V2_COCSC
Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
      0.906
I0Z4D2_COCSC
Large subunit of isopropylmalate dehydratase.
  
  
 0.892
I0ZAV3_COCSC
3-isopropylmalate dehydratase.
  
  
 0.892
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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