STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z7B7_COCSCGTP binding protein TypA. (629 aa)    
Predicted Functional Partners:
I0YL51_COCSC
T-complex protein 1 subunit delta.
     
 0.666
I0YYJ3_COCSC
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
      
 0.651
I0YS97_COCSC
Mitochondrial ribosomal protein S6.
   
 
 0.646
I0YLE0_COCSC
60S ribosomal protein L5.
   
 
 0.634
I0YRY2_COCSC
DnaJ-like protein.
  
  
 0.634
I0YUF6_COCSC
Uncharacterized protein.
      
 0.619
I0Z3X3_COCSC
NAD(P)-binding protein.
      
 0.619
I0YR45_COCSC
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.608
rps2
Ribosomal protein S2.
   
 
 0.593
I0YQT7_COCSC
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.593
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.