STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z8H6_COCSCLipid_DES domain-containing protein. (336 aa)    
Predicted Functional Partners:
I0YJK1_COCSC
DNase I-like protein.
     
 0.948
I0YY56_COCSC
DAGKc domain-containing protein.
    
 0.935
I0YQP2_COCSC
Neutral ceramidase.
     
 0.929
I0YTM5_COCSC
DAGKc domain-containing protein.
    
 0.921
I0YXZ3_COCSC
DAGKc domain-containing protein.
    
 0.921
I0Z2N8_COCSC
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
  0.900
I0Z3R3_COCSC
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
 
      0.899
I0YVS0_COCSC
PLP-dependent transferase.
   
  
 0.733
I0YTW5_COCSC
PLP-dependent transferase.
   
  
 0.643
I0Z728_COCSC
Uncharacterized protein.
   
  
 0.618
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.