STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z8L1_COCSCTetrapyrrole methylase family protein. (344 aa)    
Predicted Functional Partners:
I0YRT4_COCSC
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
     
 0.702
I0YJZ5_COCSC
DUF163-domain-containing protein.
     
 0.681
I0YQY1_COCSC
Alpha/beta knot.
     
 0.681
I0YS97_COCSC
Mitochondrial ribosomal protein S6.
  
  
 0.656
I0YM48_COCSC
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
  
 0.634
I0YYM6_COCSC
Bacterial methyltransferase.
     
 0.617
I0YR45_COCSC
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
  
 0.604
rps14
Ribosomal protein S14.
   
  
 0.555
I0YT89_COCSC
40S ribosomal protein S29.
   
  
 0.555
I0YTL4_COCSC
S-adenosyl-L-methionine dependent tRNA/rRNA methyltransferase.
   
  
 0.515
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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