STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z8P9_COCSCUncharacterized protein. (473 aa)    
Predicted Functional Partners:
I0YWQ1_COCSC
ATP-dependent hsl protease ATP-binding subunit hslU.
  
 
 0.519
I0Z080_COCSC
ClpX, ATPase regulatory subunit.
  
 
 0.519
I0Z7C5_COCSC
HslV component of HslUV peptidase.
  
 
 0.519
I0YW05_COCSC
ClpB chaperone, Hsp100 family; Belongs to the ClpA/ClpB family.
   
 
 0.483
I0Z1A5_COCSC
UVR domain-containing protein; Belongs to the ClpA/ClpB family.
   
 
 0.483
I0Z7U4_COCSC
Heat shock protein; Belongs to the ClpA/ClpB family.
   
 
 0.483
I0Z9N1_COCSC
ATP-dependent Clp protease ATPase subunit; Belongs to the ClpA/ClpB family.
   
 
 0.483
I0YUI4_COCSC
NADH-quinone oxidoreductase.
   
 
 0.430
I0YVC8_COCSC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.401
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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