STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z8W8_COCSCABC1-domain-containing protein. (401 aa)    
Predicted Functional Partners:
I0Z1B5_COCSC
ABC1-domain-containing protein.
  
   
 0.550
I0YJ39_COCSC
ABC1 domain-containing protein.
  
   
 0.549
I0YSU3_COCSC
ABC1-domain-containing protein.
  
   
 0.546
I0ZAD9_COCSC
Ubiquinone biosynthesis protein.
  
 
 
0.499
I0ZAS0_COCSC
WD40 repeat-like protein.
   
    0.441
I0YZI6_COCSC
PRP38-domain-containing protein.
   
    0.426
I0Z0F9_COCSC
Uncharacterized protein.
   
    0.426
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.