STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z9A3_COCSCP-loop containing nucleoside triphosphate hydrolase protein. (354 aa)    
Predicted Functional Partners:
I0YV96_COCSC
DNA replication factor C complex subunit 5.
   
0.999
I0Z569_COCSC
Putative replication factor C 37 kDa subunit.
   
0.999
I0YM24_COCSC
RFC1-domain-containing protein.
   
 0.998
I0YUV4_COCSC
DNA replication factor C complex subunit 2.
   
0.998
I0YKQ8_COCSC
AAA domain-containing protein.
   
 0.997
I0Z7V2_COCSC
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.977
I0Z8H1_COCSC
Uncharacterized protein.
   
 0.976
I0YVA6_COCSC
Checkpoint protein; Belongs to the HUS1 family.
    
 0.975
I0YUM6_COCSC
Uncharacterized protein.
   
 0.971
I0YN90_COCSC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.966
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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