STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0Z9S7_COCSCAlanine aminotransferase. (523 aa)    
Predicted Functional Partners:
I0Z2R2_COCSC
Glycolate oxidase.
  
 
 0.965
I0Z0L4_COCSC
Serine glyoxylate aminotransferase.
  
 0.952
I0Z0L5_COCSC
Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.946
I0YNN5_COCSC
Dihydrolipoyl dehydrogenase.
   
 0.937
I0YIW6_COCSC
Aspartate aminotransferase.
   
 0.935
I0YLU9_COCSC
Aspartate aminotransferase.
   
 0.934
I0YPA4_COCSC
Malic-domain-containing protein.
  
 0.934
I0YQQ2_COCSC
Aminotran_1_2 domain-containing protein.
   
 0.934
I0YLA3_COCSC
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.933
I0Z401_COCSC
Ferredoxin-dependent glutamate synthase.
  
 
 0.933
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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