STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0ZAB6_COCSCBiotin synthase. (415 aa)    
Predicted Functional Partners:
COCSUDRAFT_810
PLP-dependent transferase.
 
 
 0.992
I0YR67_COCSC
Class II aaRS and biotin synthetase.
  
 
 0.926
I0Z9C2_COCSC
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
  
 0.867
I0YUY5_COCSC
PLP-dependent transferase.
 
  
 0.722
I0YMU3_COCSC
Ornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
  
 0.706
I0YPZ9_COCSC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.703
I0ZAC1_COCSC
PLP-dependent transferase.
 
  
 0.686
I0YVC8_COCSC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.674
I0Z2I4_COCSC
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
  
 0.657
I0Z7U0_COCSC
2-amino-3-ketobutyrate coenzyme A ligase.
 
  
 0.595
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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