STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I0ZAW6_COCSCCSD-domain-containing protein. (167 aa)    
Predicted Functional Partners:
I0YZ00_COCSC
RNA polymerase Rpb6.
   
 
 0.707
I0YW85_COCSC
IGPS domain-containing protein.
  
  
 0.682
I0Z1T4_COCSC
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
 0.674
I0Z4F3_COCSC
RRM domain-containing protein.
  
 0.661
I0Z5J6_COCSC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.655
I0Z2Z1_COCSC
WW domain-containing protein.
    
 0.654
I0YT58_COCSC
Nuclear cap-binding protein subunit 2.
   
  0.652
I0YVI3_COCSC
Small nuclear ribo protein F.
    
  0.649
I0Z402_COCSC
Uncharacterized protein.
   
 0.649
I0YJE2_COCSC
DNA-directed RNA polymerase II, 36 kDa polypeptide.
   
 
 0.648
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.