STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV20964.1Dinuclear metal center protein, YbgI/SA1388 family. (292 aa)    
Predicted Functional Partners:
SFV20962.1
Hypothetical protein.
  
  
 0.765
SFV20960.1
Probable phosphoglycerate mutase.
  
  
 0.739
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.639
SFV21999.1
Sensor histidine kinase inhibitor, KipI family.
  
  
 0.585
SFV22962.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
 
  0.505
SFV20877.1
Nucleoside diphosphate kinase; Belongs to the NDK family.
   
  0.499
folE
GTP cyclohydrolase I.
    
 0.477
SFV21802.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
   
    0.476
SFV23739.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.471
SFV20968.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.430
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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