STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV20980.1Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. (181 aa)    
Predicted Functional Partners:
SFV20982.1
Tryptophan 2-monooxygenase.
       0.572
SFV20985.1
Predicted amidohydrolase.
       0.572
SFV20976.1
Lysophospholipase L1.
       0.547
SFV20978.1
Polyphosphate kinase 2, PA0141 family.
       0.547
SFV20987.1
Conserved hypothetical integral membrane protein TIGR02206.
       0.460
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
    0.424
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.