STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV21372.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
SFV21370.1
TadE-like protein.
 
     0.929
SFV21368.1
Flp pilus assembly protein TadG.
 
     0.923
SFV21376.1
Tight adherence protein B.
 
     0.904
SFV21374.1
Tight adherence protein C.
 
     0.876
SFV21366.1
Hypothetical protein.
 
     0.845
SFV21378.1
Pilus assembly protein CpaF.
 
     0.776
SFV20548.1
Hypothetical protein.
  
     0.766
SFV20549.1
Cellulose biosynthesis protein BcsQ.
  
     0.762
SFV21813.1
Hypothetical protein.
  
     0.701
SFV20544.1
Hypothetical protein.
  
     0.685
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.