STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV22198.1Protein of unknown function. (74 aa)    
Predicted Functional Partners:
SFV22200.1
NAD-dependent protein deacetylase, SIR2 family.
       0.759
SFV22202.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
       0.564
SFV22196.1
Hypothetical protein.
       0.526
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.522
crgA
Uncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
  
     0.519
SFV23694.1
Uncharacterized conserved protein, DUF885 familyt.
  
     0.418
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.