STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV22457.1Predicted transcriptional regulator. (119 aa)    
Predicted Functional Partners:
SFV22459.1
Peptidase family M48.
 
 
  0.951
SFV21330.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
    
  0.633
SFV22452.1
ATP-binding cassette, subfamily C, CydCD.
 
     0.629
SFV22455.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
     0.602
SFV22454.1
Cytochrome d ubiquinol oxidase subunit II.
 
     0.559
SFV20221.1
Copper ion binding protein.
  
  
 0.476
SFV23051.1
Copper ion binding protein.
  
  
 0.476
SFV23981.1
Copper chaperone CopZ.
  
  
 0.476
SFV25105.1
Copper chaperone CopZ.
  
  
 0.476
SFV20108.1
Hypothetical protein.
    
  0.452
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.