STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV22650.1Protein of unknown function. (159 aa)    
Predicted Functional Partners:
SFV22648.1
Putative transcriptional regulator.
 
    0.956
SFV22300.1
Putative transcriptional regulator.
 
    0.812
SFV22846.1
Cro/C1-type HTH DNA-binding domain-containing protein.
 
    0.738
SFV22646.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
       0.561
SFV22652.1
Nucleoside-diphosphate-sugar epimerase.
       0.535
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.