STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV23280.1Branched-chain amino acid transport protein (AzlD). (103 aa)    
Predicted Functional Partners:
SFV23278.1
Predicted branched-chain amino acid permease (azaleucine resistance).
 
  
 0.986
SFV23210.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.581
SFV24996.1
Hypothetical protein.
  
     0.481
SFV21114.1
50S ribosome-binding GTPase.
  
     0.454
SFV21116.1
Dynamin family protein.
  
     0.438
SFV24216.1
Hypothetical protein.
  
     0.433
SFV23276.1
Uncharacterized membrane protein YjjP, DUF1212 family.
       0.419
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.